• Hofmann Lab
  • People
  • Research
  • Publications
  • Teaching
  • Public Engagement
  • Links
  • News
  • Skip to primary navigation
  • Skip to main content
UT Shield
The Hofmann Lab
  • Hofmann Lab
  • People
    • Former Lab Members
  • Research
  • Publications
  • Teaching
  • Public Engagement
  • Links
  • News

News

November 14, 2018, Filed Under: 2018

Real or fake? Natural and artificial social stimuli elicit divergent behavioral and neural responses in the mangrove rivulus fish, Kryptolebias marmoratus.

Citation:

Li CY, Hofmann HA, Harris ML, Earley RL. Real or fake? Natural and artificial social stimuli elicit divergent behavioral and neural responses in the mangrove rivulus fish, Kryptolebias marmoratus. Proc. R. Soc. B. [Internet]. 285 (20181610).

Publisher’s Version

Abstract

Understanding how the brain processes social information and generates adaptive behavioural responses is a major goal in neuroscience. We examined behaviour and neural activity patterns in socially relevant brain nuclei of hermaphroditic mangrove rivulus fish (Kryptolebias marmoratus) provided with different types of social stimuli: stationary model opponent, regular mirror, non-reversing mirror and live opponent. We found that: (i) individuals faced with a regular mirror were less willing to interact with, delivered fewer attacks towards and switched their orientation relative to the opponent more frequently than fish exposed to a non-reversing mirror image or live opponent; (ii) fighting with a regular mirror image caused higher expression of immediate-early genes (IEGs: egr-1 and c-Fos) in the teleost homologues of the basolateral amygdala and hippocampus, but lower IEG expression in the preoptic area, than fighting with a non-reversing mirror image or live opponent; (iii) stationary models elicited the least behavioural and IEG responses among the four stimuli; and (iv) the nonreversing mirror image and live opponent drove similar behavioural and neurobiological responses. These results suggest that the various stimuli provide different types of information related to conspecific recognition in the context of aggressive contests, which ultimately drive different neurobiological responses.

li_et_al_2018.pdf

October 8, 2018, Filed Under: 2018

A tagging method for very small fish

Citation:

Solomon-Lane TK, Hofmann HA. A tagging method for very small fish. bioRxiv.

Abstract

The ability to reliably identify individuals over time and across contexts is essential in numerous areas of science. There are a variety of well-established methods for uniquely marking individuals, such as using paint or dye, visible implant elastomer tags, numbers or barcodes glued to the animal, passive integrated transponders, and more. For some species, life history stages, and/or experiments, however, these existing tagging methods are not sufficient. Here, we describe the method we developed for tagging juveniles of the African cichlid fish, Astatotilapia burtoni, which are too small for the methods used to tag adults. We used fishing line threaded through the needle of an insulin syringe to tie a loop of line through the dorsal muscle of juveniles as small as 10 mm standard length. Unique color patterns on the line can be used to distinguish among individuals. The tag is compatible with normal locomotion and social behavior, discernible to the eye and on camera, durable enough to last at least months, and the juvenile can grow with the tag. For A. burtoni, which is a model system in social neuroscience, the lack of an appropriate tagging method for very small juveniles likely contributes to the relative lack of early-life studies, and the same may be true for other small species. We expect this method to be useful in a variety of species and will facilitate the integration of organismal and behavioral development into more research programs.

solomon-lane_and_hofmann_2018.pdf

July 2, 2018, Filed Under: 2018

Serendipitous Scaffolding to improve a Genetic Algorithm’s Speed and Quality

Citation:

Goldsby HJ, Young RL, Hofmann HA, Hintze A. Serendipitous Scaffolding to improve a Genetic Algorithm’s Speed and Quality, in Genetic and Evolutionary Computation Conference (GECCO). Kyoto (Japan) ; :959-966.

Publisher’s Version

Abstract

A central challenge to evolutionary computation is enabling techniques to evolve increasingly complex target end products. Frequently direct approaches that reward only the target end product itself are not successful because the path between the starting conditions and the target end product traverses through a complex fitness landscape, where the directly accessible intermediary states may be require deleterious or even simply neutral mutations. As such, a host of techniques have sprung up to support evolutionary computation techniques taking these paths. One technique is scaffolding where intermediary targets are used to provide a path from the starting state to the end state. While scaffolding can be successful within well-understood domains it also poses the challenge of identifying useful intermediaries. Within this paper we first identify some shortcomings of scaffolding approaches — namely, that poorly selected intermediaries may in fact hurt the evolutionary computation’s chance of producing the desired target end product. We then describe a light-weight approach to selecting intermediate scaffolding states that improve the efficacy of the evolutionary computation.

goldsby_et_al_2018.pdf

October 31, 2017, Filed Under: 2017

Neurogenomics of behavioural plasticity in socioecological contexts.

Citation:

Baker MR, Hofmann HA, Wong RY. Neurogenomics of behavioural plasticity in socioecological contexts. In: Encyclopedia of Life Sciences. Chichester: John Wiley & Sons, Ltd.

Abstract

Social and ecological challenges often elicit behavioural and physiological responses that are adaptive and subject to selection. The varying behavioural states and traits of animals are a direct output of the nervous system and underlying molecular substrates. Changes in gene expression in response to a variety of contexts such as mate choice, aggression and developmental experience can alter a number of cellular and neural pathways that lead to changes in behaviour. A common framework has emerged to understand the role of the transcriptome in animal behaviour. Behavioural plasticity describes both an individual’s ability to modify behavioural states and correlated suites of behaviour in populations, which may constrain variance across contexts. By integrating the study of behavioural plasticity with genome scale, bioinformatics and candidate gene analyses, we are rapidly expanding our understanding of this kind of organismal flexibility, its relationship with the genome and its evolutionary implications.

baker_etal_els_2017.pdf

September 25, 2017, Filed Under: 2018

Gene expression signatures of mating system evolution

Citation:

Renn SCP, Machado HE, Duftner N, Sessa AK, Harris RM, Hofmann HA. Gene expression signatures of mating system evolution. Genome [Internet].

Publisher’s Version

Abstract

The diversity of mating systems among animals is astounding. Importantly, similar mating systems have evolved even across distantly related taxa. However, our understanding of the mechanisms underlying these convergently evolved phenotypes is limited. Here, we examine on a genomic scale the neuromolecular basis of social organization in Ectodini cichlids from Lake Tanganyika. Using field collected males and females of four closely related species representing two independent evolutionary transitions from polygyny to monogamy, we take a comparative transcriptomic approach to test the hypothesis that these independent transitions have recruited similar gene sets. Our results demonstrate that while lineage and species exert a strong influence on neural gene expression profiles, social phenotype can also drive gene expression evolution. Specifically, 331 genes (~6% of those assayed) were associated with monogamous mating systems independent of species or sex. Among these genes, we find a strong bias (4:1 ratio) toward genes with increased expression in monogamous individuals. A highly conserved nonapeptide system known to be involved in the regulation of social behavior across animals was not associated with mating system in our analysis. Overall, our findings suggest deep molecular homologies underlying the convergent or parallel evolution of monogamy in different lineages of Ectodini cichlids.

renn_et_al_2018.pdf

September 1, 2017, Filed Under: 2017

Neuromolecular Regulation of Aggression Differs by Social Role during Joint Territory Defense

Citation:

Weitekamp CA, Nguyen J, Hofmann HA. Neuromolecular Regulation of Aggression Differs by Social Role during Joint Territory Defense. Integrative and Comparative Biology. :1-9.

Abstract

In response to a territory intrusion, neighboring males of the African cichlid fish Astatotilapia burtoni engage in aggressive joint territory defense in a manner that depends on their social role. Here, we examine the possible function of several neuroendocrine and neuromodulator pathways previously implicated in the regulation of complex social behavior. We find that the neuromolecular regulation of aggression during joint territory defense is very much dependent on an individual’s role in this context. In neighbors but not in residents, aggression is correlated to gene expression in the medial part of the dorsal telencephalon (area Dm), the putative homolog to the mammalian basolateral amygdala. This correlation is strikingly high for expression of the serotonin receptor 5-HT2c, suggesting the serotonin system is important in regulating context-dependent behavior. Furthermore, by examining candidate gene expression co-variance patterns in area Dm and in the lateral part of the dorsal telencephalon (area Dl), the putative homolog to the mammalian hippocampus, we identify two main patterns: gene expression is co-regulated within, but not across, brain regions, and co-regulation is synergistic rather than antagonistic. Our results highlight the critical effect of social context on both behavior and its neuromolecular basis.

weitekamp_et_al._2017_icb.pdf

August 25, 2017, Filed Under: 2017

Evolution of Animal Neural Systems

Citation:

Liebeskind BJ, Hofmann HA, Hillis DA, Zakon HH. Evolution of Animal Neural Systems. Annual Review of Ecology, Evolution, and Systematics. 48 :377-398.

Abstract

Nervous systems are among the most spectacular products of evolution. Their provenance and evolution have been of interest and often the subjects of intense debate since the late nineteenth century. The genomics era has provided researchers with a new set of tools with which to study the early evolution of neurons, and recent progress on the molecular evolution of the first neurons has been both exciting and frustrating. It has become increasingly obvious that genomic data are often insufficient to reconstruct complex phenotypes in deep evolutionary time because too little is known about how gene function evolves over deep time. Therefore, additional functional data across the animal tree are a prerequisite to a fuller understanding of cell evolution. To this end, we review the functional modules of neurons and the evolution of their molecular components, and we introduce the idea of hierarchical molecular evolution.

liebeskind_et_al_2017.pdf

August 13, 2017, Filed Under: 2017

Arginine vasotocin preprohormone is expressed in surprising regions of the teleost forebrain

Citation:

Rodriguez-Santiago M, Nguyen J, Winton LS, Weitekamp CA, Hofmann HA. Arginine vasotocin preprohormone is expressed in surprising regions of the teleost forebrain. Frontiers in Endocrinology [Internet]. 8.

Publisher’s Version

Abstract

Nonapeptides play a fundamental role in the regulation of social behavior, among numerous other functions. In particular, arginine vasopressin and its non-mammalian homolog, arginine vasotocin (AVT), have been implicated in regulating affiliative, reproductive, and aggressive behavior in many vertebrate species. Where these nonapeptides are synthesized in the brain has been studied extensively in most vertebrate lineages. While several hypothalamic and forebrain populations of vasopressinergic neurons have been described in amniotes, the consensus suggests that the expression of AVT in the brain of teleost fish is limited to the hypothalamus, specifically the preoptic area (POA) and the anterior tuberal nucleus (putative homolog of the mammalian ventromedial hypothalamus). However, as most studies in teleosts have focused on the POA, there may be an ascertainment bias. Here, we revisit the distribution of AVT preprohormone mRNA across the dorsal and ventral telencephalon of a highly social African cichlid fish. We first use in situ hybridization to map the distribution of AVT preprohormone mRNA across the telencephalon. We then use quantitative real-time polymerase chain reaction to assay AVT expression in the dorsomedial telencephalon, the putative homolog of the mammalian basolateral amygdala. We find evidence for AVT preprohormone mRNA in regions previously not associated with the expression of this nonapeptide, including the putative homologs of the mammalian extended amygdala, hippocampus, striatum, and septum. In addition, AVT preprohormone mRNA expression within the basolateral amygdala homolog differs across social contexts, suggesting a possible role in behavioral regulation. We conclude that the surprising presence of AVT preprohormone mRNA within dorsal and medial telencephalic regions warrants a closer examination of possible AVT synthesis locations in teleost fish, and that these may be more similar to what is observed in mammals and birds.

rodriguez-santiago_et_al._2017.pdf

July 15, 2017, Filed Under: 2017

Increasing the complexity of solutions produced by an evolutionary developmental system.

Citation:

Goldsby HJ, Young RL, Hofmann HA, Hintze A. Increasing the complexity of solutions produced by an evolutionary developmental system., in Genetic and Evolutionary Computation Conference (GECCO). Berlin (Germany) ; :57-58.

Abstract

Evolutionary computation and neuroevolution seek to create systems of ever increasing sophistication, such that the digitally evolved forms reflect the variety, diversity, and complexity seen within nature in living organisms. In general, most evolutionary computation and neuroevolution techniques do so by encoding the final form without any type of development. This is in contrast to nature, where most complex organisms go through a developmental period. Here we focus on an evolving digital tissues that develop from a single cell and unfold into a complex body plan. It quickly became evident that evolving developing forms is quite challenging. We compare four different techniques that have successfully been employed within evolutionary computation to evolve complex forms and behavior: scaffolding (i.e., gradually increasing the difficulty of the task rewarded by the environment over evolutionary time), stepping stones (i.e., rewarding easier tasks within an environment that can co-opted for the performance of more complex tasks), and island models (i.e., rewarding different fitness functions within different subpopulations with migration). We show the effect of these methods on the evolution of complex forms that develop from a single cell, the rate of adaptation, and different dimensions of robustness and variation among solutions.

goldsby_et_al_2017.pdf

April 28, 2017, Filed Under: 2017

A role for oxytocin-like receptor in social habituation in a teleost

Citation:

Weitekamp CA, Solomon-Lane TK, Del Valle P, Triki Z, Nugent BM, Hofmann HA. A role for oxytocin-like receptor in social habituation in a teleost. Brain, Behavior, and Evolution. 89 :153-161.

Abstract

Oxytocin (OT) mediates social habituation in rodent model systems, but its role in mediating this effect in other vertebrates is unknown. We used males of the African cichlid fish, Astatotilapia burtoni , to investigate two aspects of isotocin (IT; an OT homolog) signaling in social habituation. First, we examined the expression of IT receptor 2 (ITR2) as well as two immediate early genes in brain regions implicated in social recognition. Next, we examined IT neuron activity using immunohistochemistry. Patterns of gene expression in homologs of the amygdala and hippocampus implicate IT signaling in these regions in social habituation to a territorial neighbor. In the preoptic area, the expression of the ITR2 subtype and IT neuron activity respond to the presence of a male, independent of familiarity. Our results implicate IT in mediating social habituation in a teleost.

weitekamp_et_al_2017.pdf

  • « Go to Previous Page
  • Page 1
  • Interim pages omitted …
  • Page 3
  • Page 4
  • Page 5
  • Page 6
  • Page 7
  • Interim pages omitted …
  • Page 15
  • Go to Next Page »

UT Home | Emergency Information | Site Policies | Web Accessibility | Web Privacy | Adobe Reader

© The University of Texas at Austin 2026