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The Chen Laboratory

Genomics and Epigenetics of Polyploidy and Heterosis

Datasets

  1. Sensitivity of oligo and cDNA microarrays in Arabidopsis and related species. PubMed; Dataset
  2. Genomewide nonadditive gene expression in Arabidopsis allotetraploids. PubMed; Dataset
  3. Arabidopsis histone deacetylase 1 (AtHD1) mutant. PubMed; Dataset
  4. Gene expression changes in met1-RNAi lines of Arabidopsis suecica. PubMed; Dataset
  5. Duplicate genes increase expression diversity in allopolyploids. PubMedDataset
  6. Analysis of small RNAs in Arabidopsis allopolyploids and progenitors. PubMed; Dataset
  7. FLC genomic regions in A. thaliana, A. arenosa, and A. lyrata. PubMed; Dataset
  8. Genome-wide analysis of small RNAs in cotton fibers PubMed; Dataset1; Dataset2
  9. Coordinated histone modifications and gene expression in allopolyploids. PubMed; Dataset
  10. mRNA stability in Arabidopsis allotetraploids. PubMed; Dataset
  11. Transcriptome analyses of fiber development using cotton oligo microarrays. PubMed; Dataset
  12. Maternal siRNAs, parental genome imbalance and seed development. PubMed; Dataset
  13. cis and trans regulatory divergence in allopolyploids and progenitors. PubMed; Dataset
  14. Proteomic divergecne in auto- and allopolyploids and their progenitors. PubMed; Dataset
  15. Transcriptome changes in allotetraploid cotton. PubMed; Dataset1; Dataset2
  16. Dosage-dependent and -independent gene expression novelity in polyploids. Pubmed; Dataset
  17. Sequence of an allotetraploid cotton genome (Gossypium hirsutum L. acc. TM-1). Pubmed; Dataset
  18. Circadian regulation of stress-responsive gene expression predicts heterosis. Pubmed; Dataset
  19. Disrupted paternal gene expression in Arabidopsis interspecific hybrids. Pubmed; Dataset
  20. Roles of DNA methylation during fiber development in cotton. PubMed; Dataset
  21. Early activation of circadian-mediated pathways in maize hybrids. PubMed; Dataset
  22. Histone modifications determine homoeolog expression bias in tetraploid cotton. PubMed; Dataset
  23. Maternally and paternally imprinted genes regulate rice seed development. PubMed; Dataset
  24. Roles of epialleles in allopolyploid cotton evolution and domestication. PubMed; Dataset
  25. Interactions roles of chromatin and circadian regulation in plants. PubMed; Dataset
  26. Temporal regulation of metabolome and proteome in maize heterosis. PubMed; Dataset
  27. Single-cell analysis in Arabidopsis female gametophytes. PubMed; Dataset
  28. Genomic diversifications of five allopolyploid Gossypium species. PubMed; Dataset
  29. LCM and RNA-seq analysis of cotton fiber cell development. PubMed; Dataset
  30. Concerted genomic and epigenomic evolution in allopolyploids. PubMed; Dataset
  31. An epigenetic basis of maize inbreeding depression. PubMed; Dataset
  32. Imprinting in the hybrids of cytoplasmic substitution lines. PubMed; Dataset

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