January 2, 2025, Filed Under: 2002, PublicationsCharge states rather than propensity for beta-structure determine enhanced fibrillogenesis in wild-type Alzheimer’s beta-amyloid peptide compared to E22Q Dutch mutant. Citation: Massi, F. ; Klimov, D. ; Thirumalai, D. ; Straub, J. E. Charge states rather than propensity for beta-structure determine enhanced fibrillogenesis in wild-type Alzheimer’s beta-amyloid peptide compared to E22Q Dutch mutant. Protein Sci 11, 1639-47. Download charge-states-rather-than-propensity-for-beta-structure-determine-enhanced-fibrillogenesis-in-wild-type-alzheimers-beta-amyloid-peptide-compared-to-e22q-dutch-mutant.pdf541 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2002, PublicationsExploring protein aggregation and self-propagation using lattice models: phase diagram and kinetics. Citation: Dima, R. I. ; Thirumalai, D. Exploring protein aggregation and self-propagation using lattice models: phase diagram and kinetics. Protein Sci 11, 1036-49. Download exploring-protein-aggregation-and-self-propagation-using-lattice-models-phase-diagram-and-kinetics.pdf273 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2002, PublicationsSimulations of beta-hairpin folding confined to spherical pores using distributed computing. Citation: Klimov, D. K. ; Newfield, D. ; Thirumalai, D. Simulations of beta-hairpin folding confined to spherical pores using distributed computing. Proc Natl Acad Sci U S A 99, 8019-24. Download simulations-of-beta-hairpin-folding-confined-to-spherical-pores-using-distributed-computing.pdf318 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2002, PublicationsStiffness of the distal loop restricts the structural heterogeneity of the transition state ensemble in SH3 domains. Citation: Klimov, D. K. ; Thirumalai, D. Stiffness of the distal loop restricts the structural heterogeneity of the transition state ensemble in SH3 domains. J Mol Biol 317, 721-37. Download Citation PubMed DOI
January 2, 2025, Filed Under: 2002, PublicationsIs there a unique melting temperature for two-state proteins? Citation: Klimov, D. K. ; Thirumalai, D. Is there a unique melting temperature for two-state proteins?. J Comput Chem 23, 161-5. Download Citation PubMed DOI
January 2, 2025, Filed Under: 2002, PublicationsExploring the propensities of helices in PrP(C) to form beta sheet using NMR structures and sequence alignments. Citation: Dima, R. I. ; Thirumalai, D. Exploring the propensities of helices in PrP(C) to form beta sheet using NMR structures and sequence alignments. Biophys J 83, 1268-80. Download exploring-the-propensities-of-helices-in-prpc-to-form-beta-sheet-using-nmr-structures-and-sequence-alignments.pdf541 KB Last updated on 01/03/2018 PubMed DOI
