January 2, 2025, Filed Under: 2003, PublicationsProteins associated with diseases show enhanced sequence correlation between charged residues. Citation: Dima, R. I. ; Thirumalai, D. Proteins associated with diseases show enhanced sequence correlation between charged residues. Bioinformatics 20, 2345-54. Download proteins-associated-with-diseases-show-enhanced-sequence-correlation-between-charged-residues.pdf441 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2003, PublicationsAnnealing function of GroEL: structural and bioinformatic analysis. Citation: Stan, G. ; Thirumalai, D. ; Lorimer, G. H. ; Brooks, B. R. Annealing function of GroEL: structural and bioinformatic analysis. Biophys Chem 100, 453-67. Download Citation annealing-function-of-groel-structural-and-bioinformatic-analysis.pdf1.2 MB Last updated on 01/03/2018 PubMed
January 2, 2025, Filed Under: 2003, PublicationsCaging helps proteins fold. Citation: Thirumalai, D. ; Klimov, D. K. ; Lorimer, G. H. Caging helps proteins fold. Proc Natl Acad Sci U S A 100, 11195-7. Download caging-helps-proteins-fold.pdf208 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2003, PublicationsCan energy landscape roughness of proteins and RNA be measured by using mechanical unfolding experiments? Citation: Hyeon, C. ; Thirumalai, D. Can energy landscape roughness of proteins and RNA be measured by using mechanical unfolding experiments?. Proc Natl Acad Sci U S A 100, 10249-53. Download can-energy-landscape-roughness-of-proteins-and-rna-be_measured-by-using-mechanical-unfolding-experiments.pdf378 KB Last updated on 08/18/2017 PubMed DOI
January 2, 2025, Filed Under: 2003, PublicationsDissecting the assembly of Abeta16-22 amyloid peptides into antiparallel beta sheets. Citation: Klimov, D. K. ; Thirumalai, D. Dissecting the assembly of Abeta16-22 amyloid peptides into antiparallel beta sheets. Structure 11, 295-307. Download dissecting-the-assembly-of-a-beta-16-22-amyloid-peptides-into-antiparallel-beta-sheets.pdf603 KB Last updated on 08/18/2017 PubMed
January 2, 2025, Filed Under: 2003, PublicationsThe dominant interaction between peptide and urea is electrostatic in nature: a molecular dynamics simulation study. Citation: Tobi, D. ; Elber, R. ; Thirumalai, D. The dominant interaction between peptide and urea is electrostatic in nature: a molecular dynamics simulation study. Biopolymers 68, 359-69. Download the-dominant-interaction-between-peptide-and-urea-is-electrostatic-in-nature-a-molecular-dynamics-simulation-study.pdf5.39 MB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2003, PublicationsEmerging ideas on the molecular basis of protein and peptide aggregation. Citation: Thirumalai, D. ; Klimov, D. K. ; Dima, R. I. Emerging ideas on the molecular basis of protein and peptide aggregation. Curr Opin Struct Biol 13, 146-59. Download emerging-ideas-on-the-molecular-basis-of-protein-and-peptide-aggregation.pdf686 KB Last updated on 01/03/2018 PubMed
January 2, 2025, Filed Under: 2003, PublicationsMolecular dynamics simulations of end-to-end contact formation in hydrocarbon chains in water and aqueous urea solution. Citation: Mountain, R. D. ; Thirumalai, D. Molecular dynamics simulations of end-to-end contact formation in hydrocarbon chains in water and aqueous urea solution. J Am Chem Soc 125, 1950-7. Download Citation molecular-dynamics-simulations-of-end-to-end-contact-formation-in-hydrocarbon-chains-in-water-and-aqueous-urea-solution.pdf201 KB Last updated on 08/18/2017 PubMed DOI
