January 2, 2025, Filed Under: 2004, PublicationsCompaction of a bacterial group I ribozyme coincides with the assembly of core helices. Citation: Perez-Salas, U. A. ; Rangan, P. ; Krueger, S. ; Briber, R. M. ; Thirumalai, D. ; Woodson, S. A. Compaction of a bacterial group I ribozyme coincides with the assembly of core helices. Biochemistry 43, 1746-53. Download compaction-of-a-bacterial-group-i-ribozyme-coincides-with-the-assembly-of-core-helices.pdf141 KB Last updated on 08/18/2017 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsOrientational potentials extracted from protein structures improve native fold recognition. Citation: Buchete, N. – V. ; Straub, J. E. ; Thirumalai, D. Orientational potentials extracted from protein structures improve native fold recognition. Protein Sci 13, 862-74. Download orientational-potentials-extracted-from-protein-structures-improve-native-fold-recognition.pdf360 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsAqueous urea solution destabilizes Abeta(16-22) oligomers. Citation: Klimov, D. K. ; Straub, J. E. ; Thirumalai, D. Aqueous urea solution destabilizes Abeta(16-22) oligomers. Proc Natl Acad Sci U S A 101, 14760-5. Download aqueous-urea-solution-destabilizes-abeta16-22-oligomers.pdf446 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsContinuous anisotropic representation of coarse-grained potentials for proteins by spherical harmonics synthesis. Citation: Buchete, N. – V. ; Straub, J. E. ; Thirumalai, D. Continuous anisotropic representation of coarse-grained potentials for proteins by spherical harmonics synthesis. J Mol Graph Model 22, 441-50. Download continuous-anisotropic-representation-of-coarse-grained-potentials-for-proteins-by-spherical-harmonics-synthesis.pdf581 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsDevelopment of novel statistical potentials for protein fold recognition. Citation: Buchete, N. – V. ; Straub, J. E. ; Thirumalai, D. Development of novel statistical potentials for protein fold recognition. Curr Opin Struct Biol 14, 225-32. Download development-of-novel-statistical-potentials-for-protein-fold-recognition.pdf296 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsFinite size effects on thermal denaturation of globular proteins. Citation: Li, M. S. ; Klimov, D. K. ; Thirumalai, D. Finite size effects on thermal denaturation of globular proteins. Phys Rev Lett 93, 268107. Download Citation finite-size-effects-on-thermal-denaturation-of-globular-proteins.pdf134 KB Last updated on 08/18/2017 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsFolding of the Tetrahymena ribozyme by polyamines: importance of counterion valence and size. Citation: Koculi, E. ; Lee, N. – K. ; Thirumalai, D. ; Woodson, S. A. Folding of the Tetrahymena ribozyme by polyamines: importance of counterion valence and size. J Mol Biol 341, 27-36. Download folding-of-the-tetrahymena-ribozyme-by-polyamines-importance-of-counterion-valence-and-size.pdf506 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsProbing the instabilities in the dynamics of helical fragments from mouse PrPC. Citation: Dima, R. I. ; Thirumalai, D. Probing the instabilities in the dynamics of helical fragments from mouse PrPC. Proc Natl Acad Sci U S A 101, 15335-40. Download Citation probing-the-instabilities-in-the-dynamics-of-helical-fragments-from-mouse-prpc.pdf372 KB Last updated on 01/03/2018 PubMed DOI
January 2, 2025, Filed Under: 2004, PublicationsPulling-speed-dependent force-extension profiles for semiflexible chains. Citation: Lee, N. – K. ; Thirumalai, D. Pulling-speed-dependent force-extension profiles for semiflexible chains. Biophys J 86, 2641-9. Download pulling-speed-dependent-force-extension-profiles-for-semiflexible-chains.pdf263 KB Last updated on 08/18/2017 PubMed DOI
