Citation:
Stan, G. ; Brooks, B. R. ; Lorimer, G. H. ; Thirumalai, D. Identifying natural substrates for chaperonins using a sequence-based approach. Protein Sci 14, 193-201.
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Last updated on 01/03/2018
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Probing the initial stage of aggregation of the Abeta(10-35)-protein: assessing the propensity for peptide dimerization.
Citation:
Tarus, B. ; Straub, J. E. ; Thirumalai, D. Probing the initial stage of aggregation of the Abeta(10-35)-protein: assessing the propensity for peptide dimerization. J Mol Biol 345, 1141-56.
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Last updated on 01/03/2018
Dynamics of unbinding of cell adhesion molecules: transition from catch to slip bonds.
Citation:
Barsegov, V. ; Thirumalai, D. Dynamics of unbinding of cell adhesion molecules: transition from catch to slip bonds. Proc Natl Acad Sci U S A 102, 1835-9.
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Last updated on 01/03/2018
Extracting stacking interaction parameters for RNA from the data set of native structures.
Citation:
Dima, R. I. ; Hyeon, C. ; Thirumalai, D. Extracting stacking interaction parameters for RNA from the data set of native structures. J Mol Biol 347, 53-69.
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Last updated on 08/18/2017
Mechanical unfolding of RNA hairpins.
Citation:
Hyeon, C. ; Thirumalai, D. Mechanical unfolding of RNA hairpins. Proc Natl Acad Sci U S A 102, 6789-94.
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Last updated on 08/18/2017
Molecular crowding enhances native state stability and refolding rates of globular proteins.
Citation:
Cheung, M. S. ; Klimov, D. ; Thirumalai, D. Molecular crowding enhances native state stability and refolding rates of globular proteins. Proc Natl Acad Sci U S A 102, 4753-8.
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 | molecular-crowding-enhances-native-state-stability-and-refolding-rates-of-globular-proteins.pdf | 597 KB |
Last updated on 08/18/2017
Network of dynamically important residues in the open/closed transition in polymerases is strongly conserved.
Citation:
Zheng, W. ; Brooks, B. R. ; Doniach, S. ; Thirumalai, D. Network of dynamically important residues in the open/closed transition in polymerases is strongly conserved. Structure 13, 565-77.
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Last updated on 01/03/2018
A novel colorimetric and fluorescent chemosensor for anions involving PET and ICT pathways.
Citation:
Thiagarajan, V. ; Ramamurthy, P. ; Thirumalai, D. ; Ramakrishnan, V. T. A novel colorimetric and fluorescent chemosensor for anions involving PET and ICT pathways. Org Lett 7 657-60.
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| a-novel-colorimetric-and-fluorescent-chemosensor-for-anions-involving-pet-and-ict-pathways.pdf | 196 KB |
Last updated on 01/03/2018
Probing the “annealing” mechanism of GroEL minichaperone using molecular dynamics simulations.
RNA and protein folding: common themes and variations.
Citation:
Thirumalai, D. ; Hyeon, C. RNA and protein folding: common themes and variations. Biochemistry 44, 4957-70.
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Last updated on 08/18/2017
