January 5, 2025, Filed Under: 2016Reply to Alberti: Are in vitro folding experiments relevant in vivo? Citation: Zhuravlev, P. I. ; Hinczewski, M. ; Chakrabarti, S. ; Marqusee, S. ; Thirumalai, D. Reply to Alberti: Are in vitro folding experiments relevant in vivo?. Proc Natl Acad Sci U S A 113, E3192. Download Citation reply-to-alberti-are-in-vitro-folding-experiments-relevant-in-vivo.pdf512 KB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2016Salt Effects on the Thermodynamics of a Frameshifting RNA Pseudoknot under Tension. Citation: Hori, N. ; Denesyuk, N. A. ; Thirumalai, D. Salt Effects on the Thermodynamics of a Frameshifting RNA Pseudoknot under Tension. J Mol Biol 428, 2847-59. Download Citation salt_effects_on_the_thermodynamics_of_a_frameshifting_rna_pseudoknot_under_tension.pdf1.32 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 201548 Design principles governing the motility of myosin motors. Citation: Thirumalai, D. 48 Design principles governing the motility of myosin motors. J Biomol Struct Dyn 33 Suppl 1, 33. Download Citation 48-design-principles-governing-the-motility-of-myosin-motors.pdf359 KB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2015Confinement-Induced Glassy Dynamics in a Model for Chromosome Organization. Citation: Kang, H. ; Yoon, Y. – G. ; Thirumalai, D. ; Hyeon, C. Confinement-Induced Glassy Dynamics in a Model for Chromosome Organization. Phys Rev Lett 115, 198102. Download Citation confinement-induced-glassy-dynamics-in-a-model-for-chromosome-organization.pdf737 KB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2015Dissecting Ubiquitin Folding Using the Self-Organized Polymer Model. Citation: Reddy, G. ; Thirumalai, D. Dissecting Ubiquitin Folding Using the Self-Organized Polymer Model. J Phys Chem B 119, 11358-70. Download Citation dissecting-ubiquitin-folding-using-the-self-organized-polymer-model.pdf3.3 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2015Helicase processivity and not the unwinding velocity exhibits universal increase with force. Citation: Pincus, D. L. ; Chakrabarti, S. ; Thirumalai, D. Helicase processivity and not the unwinding velocity exhibits universal increase with force. Biophys J 109, 220-30. Download Citation helicase-processivity-and-not-the-unwinding-velocity-exhibits-universal-increase-with-force.pdf1.51 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2015Unexpected Swelling of Stiff DNA in a Polydisperse Crowded Environment. Citation: Kang, H. ; Toan, N. M. ; Hyeon, C. ; Thirumalai, D. Unexpected Swelling of Stiff DNA in a Polydisperse Crowded Environment. J Am Chem Soc 137, 10970-8. Download Citation unexpected-swelling-of-stiff-dna-in-a-polydisperse-crowded-environment.pdf3.11 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2015Using simulations and kinetic network models to reveal the dynamics and functions of riboswitches. Citation: Lin, J. – C. ; Yoon, J. ; Hyeon, C. ; Thirumalai, D. Using simulations and kinetic network models to reveal the dynamics and functions of riboswitches. Methods Enzymol 553, 235-58. Download Citation using_simulations_and_kinetic_network_models_to_reveal_the_dynamics_and_functions_of_riboswitches.pdf1.89 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2015Effects of macromolecular crowding on the collapse of biopolymers. Citation: Kang, H. ; Pincus, P. A. ; Hyeon, C. ; Thirumalai, D. Effects of macromolecular crowding on the collapse of biopolymers. Phys Rev Lett 114, 068303. Download Citation 334-effects_of_macromolecular_crowding_on_the_collapse_of_biopolymers.pdf374 KB Last updated on 08/15/2016 PubMed DOI
January 5, 2025, Filed Under: 2015Protein folding guides disulfide bond formation Citation: Qin, M. ; Wang, W. ; Thirumalai, D. Protein folding guides disulfide bond formation. Proc. Natl. Acad. Sci. USA 112, 11241-11246. Download Citation protein-folding-guides-disulfide-bond-formation.pdf1.28 MB Last updated on 08/17/2017
