January 5, 2025, Filed Under: 2015How do metal ions direct ribozyme folding? Citation: Denesyuk, N. A. ; Thirumalai, D. How do metal ions direct ribozyme folding?. Nature Chem. 7 793–801. Download Citation how-do-metal-ions-direct-ribozyme-folding.pdf4.91 MB Last updated on 08/17/2017
January 5, 2025, Filed Under: 2015Using Simulations and Kinetic Network Models to Reveal the Dynamics and Functions of Riboswitches Citation: Lin, J. C. ; Yoon, J. ; Hyeon, C. ; Thirumalai, D. Using Simulations and Kinetic Network Models to Reveal the Dynamics and Functions of Riboswitches. In Methods in Enzymology; Academic Press; Vol. 553, pp. 235-258. Download Citation lin_me_2015.pdf1.89 MB Last updated on 07/27/2016
January 5, 2025, Filed Under: 2015Effects of Macromolecular Crowding on the Collapse of Biopolymers Citation: Kang, H. ; Pincus, P. A. ; Hyeon, C. ; Thirumalai, D. Effects of Macromolecular Crowding on the Collapse of Biopolymers. Phys. Rev. Lett. 114, 068303. Download Citation kang_prl_2015_1.pdf407 KB Last updated on 07/27/2016
January 5, 2025, Filed Under: 2014Sequence-dependent folding landscapes of adenine riboswitch aptamers. Citation: Lin, J. – C. ; Hyeon, C. ; Thirumalai, D. Sequence-dependent folding landscapes of adenine riboswitch aptamers. Phys Chem Chem Phys 16, 6376-82. Download Citation sequence-dependent-folding-landscapes-of-adenine-riboswitch-apatamers.pdf2.03 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Transmembrane fragment structures of amyloid precursor protein depend on membrane surface curvature. Citation: Dominguez, L. ; Meredith, S. C. ; Straub, J. E. ; Thirumalai, D. Transmembrane fragment structures of amyloid precursor protein depend on membrane surface curvature. J Am Chem Soc 136, 854-7. Download Citation transmembrane-fragment-structures-of-amyloid-precursor-protein-depend-on-membrane-surface-curvature.pdf1.2 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Dynamical transition and heterogeneous hydration dynamics in RNA. Citation: Yoon, J. ; Lin, J. – C. ; Hyeon, C. ; Thirumalai, D. Dynamical transition and heterogeneous hydration dynamics in RNA. J Phys Chem B 118, 7910-9. Download Citation dynamical-transition-and-heterogeneous-hydration-dynamics-in-rna.pdf2.25 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Entropy and enthalpy of interaction between amino acid side chains in nanopores. Citation: Vaitheeswaran, S. ; Thirumalai, D. Entropy and enthalpy of interaction between amino acid side chains in nanopores. J Chem Phys 141, 22D523. Download Citation entropy-and-enthalpy-of-interaction-between-amino-acid-side-chains-in-nanopores.pdf881 KB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Evidence of disorder in biological molecules from single molecule pulling experiments. Citation: Hyeon, C. ; Hinczewski, M. ; Thirumalai, D. Evidence of disorder in biological molecules from single molecule pulling experiments. Phys Rev Lett 112, 138101. Download Citation evidence-of-disorder-in-biological-molecules-from-single-molecule-pulling-experiments.pdf355 KB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Membrane-Protein Interactions Are Key to Understanding Amyloid Formation. Citation: Straub, J. E. ; Thirumalai, D. Membrane-Protein Interactions Are Key to Understanding Amyloid Formation. J Phys Chem Lett 5 633-5. Download Citation membrane-protein-interactions-are-key-to-understanding-amyloid-formation.pdf317 KB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Plasticity of hydrogen bond networks regulates mechanochemistry of cell adhesion complexes. Citation: Chakrabarti, S. ; Hinczewski, M. ; Thirumalai, D. Plasticity of hydrogen bond networks regulates mechanochemistry of cell adhesion complexes. Proc Natl Acad Sci U S A 111, 9048-53. Download Citation plasticity-of-hydrogen-bond-networks-regulates-mechanochemistry-of-cell-adhesion-complexes.pdf1.25 MB Last updated on 08/17/2017 PubMed DOI
