January 5, 2025, Filed Under: 2014Propensity to form amyloid fibrils is encoded as excitations in the free energy landscape of monomeric proteins. Citation: Zhuravlev, P. I. ; Reddy, G. ; Straub, J. E. ; Thirumalai, D. Propensity to form amyloid fibrils is encoded as excitations in the free energy landscape of monomeric proteins. J Mol Biol 426, 2653-66. Download Citation propensity-to-form-amyloid-fibrils-is-encoded-as-excitations-in-the-free-energy-landscape-of-monomeric-proteins.pdf1.67 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments. Citation: Ramm, B. ; Stigler, J. ; Hinczewski, M. ; Thirumalai, D. ; Herrmann, H. ; Woehlke, G. ; Rief, M. Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments. Proc Natl Acad Sci U S A 111, 11359-64. Download Citation sequence-resolved-free-energy-profiles-of-stress-bearing-vimentin-intermediate-filaments.pdf4.43 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Structural heterogeneity in transmembrane amyloid precursor protein homodimer is a consequence of environmental selection. Citation: Dominguez, L. ; Foster, L. ; Meredith, S. C. ; Straub, J. E. ; Thirumalai, D. Structural heterogeneity in transmembrane amyloid precursor protein homodimer is a consequence of environmental selection. J Am Chem Soc 136, 9619-26. Download Citation structural-heterogeneity-in-transmembrane-amyloid-precursor-protein-homodimer-is-a-consequence-of-environmental-selection.pdf4.18 MB Last updated on 08/17/2017 PubMed DOI
January 5, 2025, Filed Under: 2014Cellular Signaling Networks Function as Generalized Wiener-Kolmogorov Filters to Suppress Noise Citation: Thirumalai, D. ; Hinczewski, M. Cellular Signaling Networks Function as Generalized Wiener-Kolmogorov Filters to Suppress Noise. Phys. Rev. X 4 041017. Download Citation hinczewski_prx_2014.pdf815 KB Last updated on 07/27/2016
January 5, 2025, Filed Under: 2014Entropy and enthalpy of interaction between amino acid side chains in nanopores Citation: Thirumalai, D. ; Vaitheeswaran, S. Entropy and enthalpy of interaction between amino acid side chains in nanopores. Download Citation vaitheeswaran_jcp_2014.pdf881 KB Last updated on 05/10/2016
January 5, 2025, Filed Under: 2014Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments Citation: Thirumalai, D. ; Ramm, B. ; Stigler, J. ; Hinczewski, M. ; Herrmann, H. ; Woehlke, G. ; Rief, M. Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments. Download Citation ramm_pnas_2014.pdf4.43 MB Last updated on 05/10/2016
January 5, 2025, Filed Under: 2014Universal relations in the self-assembly of proteins and RNA Citation: Thirumalai, D. Universal relations in the self-assembly of proteins and RNA. Download Citation thirumalai_pb_2014.pdf150 KB Last updated on 05/10/2016
January 5, 2025, Filed Under: 2013Coarse-grained model for predicting RNA folding thermodynamics. Citation: Denesyuk, N. A. ; Thirumalai, D. Coarse-grained model for predicting RNA folding thermodynamics. J Phys Chem B 117, 4901-11. Download Citation PubMed DOI
January 5, 2025, Filed Under: 2013Exact solution of the Zwanzig-Lauritzen model of polymer crystallization under tension. Citation: Samanta, H. S. ; Thirumalai, D. Exact solution of the Zwanzig-Lauritzen model of polymer crystallization under tension. J Chem Phys 138, 104901. Download Citation PubMed DOI
January 5, 2025, Filed Under: 2013Force-induced unzipping transitions in an athermal crowded environment. Citation: Pincus, D. L. ; Thirumalai, D. Force-induced unzipping transitions in an athermal crowded environment. J Phys Chem B 117, 13107-14. Download Citation force-induced-unzipping-transitions-in-an-athermal-crowded-environment.pdf1.38 MB Last updated on 08/17/2017 PubMed DOI
