Citation:
Dima, R. I. ; Thirumalai, D. Determination of network of residues that regulate allostery in protein families using sequence analysis. Protein Sci 15, 258-68.
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Last updated on 01/03/2018
2006
Dynamic transition in tRNA is solvent induced.
Effect of finite size on cooperativity and rates of protein folding.
Citation:
Kouza, M. ; Li, M. S. ; O’Brien, E. P. ; Hu, C. – K. ; Thirumalai, D. Effect of finite size on cooperativity and rates of protein folding. J Phys Chem A 110, 671-6.
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Last updated on 01/03/2018
Forced-unfolding and force-quench refolding of RNA hairpins.
Citation:
Hyeon, C. ; Thirumalai, D. Forced-unfolding and force-quench refolding of RNA hairpins. Biophys J 90, 3410-27.
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Last updated on 01/03/2018
Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions.
Citation:
Li, M. S. ; Hu, C. – K. ; Klimov, D. K. ; Thirumalai, D. Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions. Proc Natl Acad Sci U S A 103, 93-8.
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Last updated on 01/03/2018
Nanopore-protein interactions dramatically alter stability and yield of the native state in restricted spaces.
Counterion charge density determines the position and plasticity of RNA folding transition states.
Hydrophobic and ionic interactions in nanosized water droplets.
Citation:
Vaitheeswaran, S. ; Thirumalai, D. Hydrophobic and ionic interactions in nanosized water droplets. J Am Chem Soc 128, 13490-6.
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Last updated on 01/03/2018
Kinetics of interior loop formation in semiflexible chains.
Citation:
Hyeon, C. ; Thirumalai, D. Kinetics of interior loop formation in semiflexible chains. J Chem Phys 124, 104905.
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Last updated on 01/03/2018
Low-frequency normal modes that describe allosteric transitions in biological nanomachines are robust to sequence variations.
Citation:
Zheng, W. ; Brooks, B. R. ; Thirumalai, D. Low-frequency normal modes that describe allosteric transitions in biological nanomachines are robust to sequence variations. Proc Natl Acad Sci U S A 103, 7664-9.
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Last updated on 01/03/2018
